BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008G01SP1|AL425912
(780 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig832 730 0.0
>3x_Contig832
Length = 3863
Score = 730 bits (368), Expect = 0.0
Identities = 375/376 (99%), Gaps = 1/376 (0%)
Strand = Plus / Plus
Query: 406 tatagcagaattgaagctcatcacagcgtgaaaacaatacgaagctacaataattatgtc 465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 tatagcagaattgaagctcatcacagcgtgaaaacaatacgaagctacaataattatgtc 69
Query: 466 gaatctacaagacctaaaagatgctggcgagaccagtgttgtggataaacaaacaggtca 525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 gaatctacaagacctaaaagatgctggcgagaccagtgttgtggataaacaaacaggtca 129
Query: 526 agtttatgagttagatttaacatcttactcgaacgactcagaaaaaaatggttctctacc 585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 agtttatgagttagatttaacatcttactcgaacgactcagaaaaaaatggttctctacc 189
Query: 586 aaataaacctcaaagcggagaccataatttaaagaaaggtcttaaatctgctcatattca 645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 aaataaacctcaaagcggagaccataatttaaagaaaggtcttaaatctgctcatattca 249
Query: 646 attgattgctattggtggctgtataggtactggtttgtttgttggtacttcttctactct 705
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 attgattgctattggtggctgtataggtactggtttgtttgttggtacttcttctactct 309
Query: 706 ttacaaatg-tggtcctgcaggtttatttatctcttactgtattatgtcaaccatcatct 764
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 ttacaaatgctggtcctgcaggtttatttatctcttactgtattatgtcaaccatcatct 369
Query: 765 atcctgttatgaacgc 780
||||||||||||||||
Sbjct: 370 atcctgttatgaacgc 385
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6501
Number of Sequences: 1807
Number of extensions: 6501
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 780
length of database: 10,358,551
effective HSP length: 16
effective length of query: 764
effective length of database: 10,329,639
effective search space: 7891844196
effective search space used: 7891844196
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)